# SpatialData-DB datasets, shard 04

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-lymph-node-kwdaiwyss5bvqx2n0000"></a>
## Human lymph node

- uid: `KWdaiWYSs5bvQX2n0000`
- Page: /datasets/visium-spatial-gene-expression-lymph-node-kwdaiwyss5bvqx2n0000/
- Technology: Visium
- Organism: human
- Tissue: lymph node
- Modality: RNA
- Observations (spots): 4,035
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/human-lymph-node-1-standard-1-1-0
- Load: `Catalog().dataset("KWdaiWYSs5bvQX2n0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-gg6azojrkugpwsca0000"></a>
## Mouse brain

- uid: `GG6AzOjrkugpwSca0000`
- Page: /datasets/visium-spatial-gene-expression-brain-gg6azojrkugpwsca0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,367
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313896
- Publication: https://doi.org/10.1016/j.cell.2026.03.013
- Collections: [geo-gse313896](/collections/md/f.md#geo-gse313896)
- Load: `Catalog().dataset("GG6AzOjrkugpwSca0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-tely8jhrrvocrnmn0000"></a>
## Mouse colon

- uid: `TeLy8jHRRvoCrNMn0000`
- Page: /datasets/visium-spatial-gene-expression-colon-tely8jhrrvocrnmn0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colitis
- Modality: RNA
- Observations (spots): 3,809
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334067
- Publication: https://doi.org/10.1038/s41588-026-02673-0
- Collections: [geo-gse334067](/collections/md/b.md#geo-gse334067)
- Load: `Catalog().dataset("TeLy8jHRRvoCrNMn0000").to_sdata()`


<a id="spatial-transcriptomics-breast-xvznyq7fmxjjuzxo0000"></a>
## Human breast

- uid: `xvZNyq7fmxJjUzxo0000`
- Page: /datasets/spatial-transcriptomics-breast-xvznyq7fmxjjuzxo0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 433
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aaf2403
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("xvZNyq7fmxJjUzxo0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-lkacgscvrxh8hein0000"></a>
## Human skin of body

- uid: `LkAcgScvRxH8HeIN0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-lkacgscvrxh8hein0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: cutaneous leishmaniasis
- Modality: RNA
- Observations (spots): 361
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE317987
- Publication: https://doi.org/10.3389/fimmu.2026.1870524
- Collections: [geo-gse317987](/collections/md/a.md#geo-gse317987)
- Load: `Catalog().dataset("LkAcgScvRxH8HeIN0000").to_sdata()`


<a id="visium-spatial-gene-expression-urinary-bladder-q1tf6pptg5uikwhu0000"></a>
## Human urinary bladder

- uid: `Q1Tf6PPtg5uikwHU0000`
- Page: /datasets/visium-spatial-gene-expression-urinary-bladder-q1tf6pptg5uikwhu0000/
- Technology: Visium
- Organism: human
- Tissue: urinary bladder
- Condition: bladder transitional cell carcinoma
- Modality: RNA
- Observations (spots): 699
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.sciencedirect.com/science/article/pii/S2211124724004698?via%3Dihub#app2
- Publication: https://doi.org/10.1016/j.celrep.2024.114141
- Collections: [doi-10-1016-j-celrep-2024-114141](/collections/md/3.md#doi-10-1016-j-celrep-2024-114141)
- Load: `Catalog().dataset("Q1Tf6PPtg5uikwHU0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-aiweuhdjouc4actk0000"></a>
## Human skin of body

- uid: `AIweuhdjOuc4acTK0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-aiweuhdjouc4actk0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: lichen planus
- Modality: RNA
- Observations (spots): 566
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-022-35319-w
- Publication: https://doi.org/10.1038/s41467-022-35319-w
- Collections: [doi-10-1038-s41467-022-35319-w](/collections/md/f.md#doi-10-1038-s41467-022-35319-w)
- Load: `Catalog().dataset("AIweuhdjOuc4acTK0000").to_sdata()`


<a id="merfish-brain-nhmn4vjpizzpmx2e0000"></a>
## Mouse brain

- uid: `nhmn4VjPiZzpMX2e0000`
- Page: /datasets/merfish-brain-nhmn4vjpizzpmx2e0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 8,706
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("nhmn4VjPiZzpMX2e0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-abqbdisxkatlirfa0000"></a>
## Human pancreas

- uid: `ABQbDiSXKaTLirFA0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-abqbdisxkatlirfa0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,295
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("ABQbDiSXKaTLirFA0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-wr3lfk5p4qubo8jv0000"></a>
## Mouse brain

- uid: `wR3LfK5P4QUBO8jv0000`
- Page: /datasets/visium-spatial-gene-expression-brain-wr3lfk5p4qubo8jv0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,675
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE232910
- Publication: https://doi.org/10.1038/s41587-023-01937-y
- Collections: [geo-gse232910](/collections/md/0.md#geo-gse232910)
- Load: `Catalog().dataset("wR3LfK5P4QUBO8jv0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-3ufftpyulwstdn6z0000"></a>
## Human brain

- uid: `3ufftPYUlwsTDn6Z0000`
- Page: /datasets/visium-spatial-gene-expression-brain-3ufftpyulwstdn6z0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 3,638
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE273432
- Publication: https://doi.org/10.1111/cas.70014
- Collections: [geo-gse273432](/collections/md/c.md#geo-gse273432)
- Load: `Catalog().dataset("3ufftPYUlwsTDn6Z0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-vioxweyhxa1wkn3f0000"></a>
## Mouse liver

- uid: `VIOxwEYhXA1Wkn3F0000`
- Page: /datasets/visium-spatial-gene-expression-liver-vioxweyhxa1wkn3f0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 2,694
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("VIOxwEYhXA1Wkn3F0000").to_sdata()`


<a id="visium-spatial-gene-expression-spleen-hbzp4bzbc5pxn5j70000"></a>
## Mouse spleen

- uid: `HBzP4BZbc5PXN5j70000`
- Page: /datasets/visium-spatial-gene-expression-spleen-hbzp4bzbc5pxn5j70000/
- Technology: Visium
- Organism: mouse
- Tissue: spleen
- Modality: RNA
- Observations (spots): 1,067
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("HBzP4BZbc5PXN5j70000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-ksv2zk0veabcjx4v0000"></a>
## Mouse liver

- uid: `KSV2zK0veaBcjX4V0000`
- Page: /datasets/visium-spatial-gene-expression-liver-ksv2zk0veabcjx4v0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 4,579
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7116323
- Collections: [geo-gse228195](/collections/md/1.md#geo-gse228195)
- Load: `Catalog().dataset("KSV2zK0veaBcjX4V0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-jvzcjoyl3c6b7a2q0000"></a>
## Human skin of body

- uid: `jvZcJOyl3C6B7a2Q0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-jvzcjoyl3c6b7a2q0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: cutaneous leishmaniasis
- Modality: RNA
- Observations (spots): 343
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8804028
- Collections: [geo-gse290027](/collections/md/d.md#geo-gse290027)
- Load: `Catalog().dataset("jvZcJOyl3C6B7a2Q0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-7safozxrmawwtyty0000"></a>
## Mouse brain

- uid: `7sAFOzXRmAwWtyTY0000`
- Page: /datasets/visium-spatial-gene-expression-brain-7safozxrmawwtyty0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 2,581
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE270389
- Publication: https://doi.org/10.1523/ENEURO.0260-24.2024
- Collections: [geo-gse270382](/collections/md/b.md#geo-gse270382)
- Load: `Catalog().dataset("7sAFOzXRmAwWtyTY0000").to_sdata()`


<a id="visium-spatial-gene-expression-hippocampal-formation-0dnopd5zwse5gguy0000"></a>
## Mouse hippocampal formation

- uid: `0dnopD5zWse5Gguy0000`
- Page: /datasets/visium-spatial-gene-expression-hippocampal-formation-0dnopd5zwse5gguy0000/
- Technology: Visium
- Organism: mouse
- Tissue: hippocampal formation
- Modality: RNA
- Observations (spots): 2,560
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM4656180
- Collections: [geo-gse153859](/collections/md/2.md#geo-gse153859)
- Load: `Catalog().dataset("0dnopD5zWse5Gguy0000").to_sdata()`


<a id="mibi-tof-breast-irnslc4w7qx0s1gg0000"></a>
## Human breast

- uid: `irNsLC4w7qx0s1Gg0000`
- Page: /datasets/mibi-tof-breast-irnslc4w7qx0s1gg0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 827
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("irNsLC4w7qx0s1Gg0000").to_sdata()`


<a id="mibi-tof-breast-yldqksrgzlt2prrz0000"></a>
## Human breast

- uid: `yldQKsrgzlT2prrz0000`
- Page: /datasets/mibi-tof-breast-yldqksrgzlt2prrz0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,524
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("yldQKsrgzlT2prrz0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-cortex-of-kidney-glvsaumehkathnak0000"></a>
## Human cortex of kidney

- uid: `glVSaumehkATHnak0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-cortex-of-kidney-glvsaumehkathnak0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: cortex of kidney
- Modality: Metabolomics
- Observations: 11,904
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-08-03_18h28m26s
- Load: `Catalog().dataset("glVSaumehkATHnak0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-lung-qfjciaoovhwvjz6z0000"></a>
## Human lung

- uid: `QfjCIAOovhwvJz6z0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-lung-qfjciaoovhwvjz6z0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: lung
- Modality: Metabolomics
- Observations: 14,550
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2024-02-21_07h50m30s
- Load: `Catalog().dataset("QfjCIAOovhwvJz6z0000").to_sdata()`


<a id="10x-xenium-rectum-tyye6v9flecxew7c0000"></a>
## Human rectum

- uid: `TYyE6V9FLecXeW7C0000`
- Page: /datasets/10x-xenium-rectum-tyye6v9flecxew7c0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: rectum
- Condition: ulcerative colitis
- Modality: RNA
- Observations (cells): 41,309
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330953
- Publication: https://doi.org/10.1126/science.aeh7112
- Load: `Catalog().dataset("TYyE6V9FLecXeW7C0000").to_sdata()`


<a id="10x-xenium-bone-marrow-xmfwvjtfziqp7th60000"></a>
## Human bone marrow

- uid: `XmFwvJtFziqp7th60000`
- Page: /datasets/10x-xenium-bone-marrow-xmfwvjtfziqp7th60000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Condition: plasma cell myeloma
- Modality: RNA
- Observations (cells): 69,669
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299207
- Publication: https://doi.org/10.1182/blood.2025028896
- Load: `Catalog().dataset("XmFwvJtFziqp7th60000").to_sdata()`


<a id="10x-xenium-pancreas-8db6qshfvzbuliha0000"></a>
## Mouse pancreas

- uid: `8DB6qshfvzBULIha0000`
- Page: /datasets/10x-xenium-pancreas-8db6qshfvzbuliha0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (cells): 271,489
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341984
- Load: `Catalog().dataset("8DB6qshfvzBULIha0000").to_sdata()`