# SpatialData-DB collections, shard 5 Generated from catalog release catalog-2026-11-01. Each collection has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt. ## Expression of ENL YEATS domain tumor mutations in nephrogenic or stromal lineage impairs kidney development. - Page: /collections/geo-gse283433-enl-nephrogenesis/ - Kind: comparison - Datasets: 2 - Reference: 10.1038/s41467-025-57926-z - Design: Floxed Enl T mutant alleles were crossed with Cre strains (Foxd1-GC/+ or Six2-TGC tg/+) with or without LSL-tdT Cre reporter allele to get embryonic kidney at E14.5 and E18.5 stage. RNA was extracted from whole kidney or sorted tdT+ cells for sequencing. - Members: [visium-hd-kidney-hvkvnpetrmftx9ty0000](/datasets/md/89.md#visium-hd-kidney-hvkvnpetrmftx9ty0000), [visium-hd-kidney-t20h7x1rzrseg8o80000](/datasets/md/55.md#visium-hd-kidney-t20h7x1rzrseg8o80000) ## 10x-xenium-comparison-fresh-frozen-human-ovarian-cancer - Page: /collections/10x-xenium-comparison-fresh-frozen-human-ovarian-cancer/ - Kind: comparison - Datasets: 2 - Members: [10x-xenium-ovary-d4yjkuq98oi2agpt0001](/datasets/md/b4.md#10x-xenium-ovary-d4yjkuq98oi2agpt0001), [10x-xenium-ovary-9gj73j25dg5hbi4d0001](/datasets/md/eb.md#10x-xenium-ovary-9gj73j25dg5hbi4d0001) ## Single cell profiling of primary and paired metastatic lymph node tumors in breast cancer patients. - Page: /collections/doi-10-1038-s41467-022-34581-2/ - Kind: replicates - Datasets: 4 - Reference: 10.1038/s41467-022-34581-2 - Members: [visium-spatial-gene-expression-lymph-node-q5vpfhy7jda5y3ct0000](/datasets/md/f5.md#visium-spatial-gene-expression-lymph-node-q5vpfhy7jda5y3ct0000), [visium-spatial-gene-expression-lymph-node-u2qunvmqbuaucl5y0000](/datasets/md/39.md#visium-spatial-gene-expression-lymph-node-u2qunvmqbuaucl5y0000), [visium-spatial-gene-expression-lymph-node-ll9hxee3dqpx9rll0000](/datasets/md/6c.md#visium-spatial-gene-expression-lymph-node-ll9hxee3dqpx9rll0000), [visium-spatial-gene-expression-lymph-node-xrhafytuocpa5pj10000](/datasets/md/57.md#visium-spatial-gene-expression-lymph-node-xrhafytuocpa5pj10000) ## Spatially resolved clonal copy number alterations in benign and malignant tissue. - Page: /collections/doi-10-1038-s41586-022-05023-2/ - Kind: replicates - Datasets: 23 - Reference: 10.1038/s41586-022-05023-2 - Members: [visium-spatial-gene-expression-prostate-gland-hsc72yabv00uqhad0000](/datasets/md/10.md#visium-spatial-gene-expression-prostate-gland-hsc72yabv00uqhad0000), [visium-spatial-gene-expression-prostate-gland-zvdvnfzxerjd31og0000](/datasets/md/65.md#visium-spatial-gene-expression-prostate-gland-zvdvnfzxerjd31og0000), [visium-spatial-gene-expression-prostate-gland-c2wgmdk6qgqntlsa0000](/datasets/md/66.md#visium-spatial-gene-expression-prostate-gland-c2wgmdk6qgqntlsa0000), [visium-spatial-gene-expression-prostate-gland-vstuitcnf3nievum0000](/datasets/md/44.md#visium-spatial-gene-expression-prostate-gland-vstuitcnf3nievum0000), [visium-spatial-gene-expression-prostate-gland-s21t016lcwt8r0si0000](/datasets/md/3c.md#visium-spatial-gene-expression-prostate-gland-s21t016lcwt8r0si0000), [visium-spatial-gene-expression-prostate-gland-trxqnywjwwsokare0000](/datasets/md/d2.md#visium-spatial-gene-expression-prostate-gland-trxqnywjwwsokare0000), [visium-spatial-gene-expression-prostate-gland-xbpoed3yjbxh9ifv0000](/datasets/md/3d.md#visium-spatial-gene-expression-prostate-gland-xbpoed3yjbxh9ifv0000), [visium-spatial-gene-expression-prostate-gland-rqrdgcbbvxvssowk0000](/datasets/md/7c.md#visium-spatial-gene-expression-prostate-gland-rqrdgcbbvxvssowk0000), [visium-spatial-gene-expression-prostate-gland-eib57to7st8eei7o0000](/datasets/md/cd.md#visium-spatial-gene-expression-prostate-gland-eib57to7st8eei7o0000), [visium-spatial-gene-expression-prostate-gland-wcycrx4uq106s8rx0000](/datasets/md/2c.md#visium-spatial-gene-expression-prostate-gland-wcycrx4uq106s8rx0000), [visium-spatial-gene-expression-prostate-gland-rurc0td1pkyrmehg0000](/datasets/md/18.md#visium-spatial-gene-expression-prostate-gland-rurc0td1pkyrmehg0000), [visium-spatial-gene-expression-prostate-gland-kxw8sqrtabwirw2j0000](/datasets/md/bf.md#visium-spatial-gene-expression-prostate-gland-kxw8sqrtabwirw2j0000), [visium-spatial-gene-expression-prostate-gland-oxvj8ubxluu8njfk0000](/datasets/md/7a.md#visium-spatial-gene-expression-prostate-gland-oxvj8ubxluu8njfk0000), [visium-spatial-gene-expression-prostate-gland-ks3asykvjyx3odeu0000](/datasets/md/0f.md#visium-spatial-gene-expression-prostate-gland-ks3asykvjyx3odeu0000), [visium-spatial-gene-expression-prostate-gland-gk7zcs0xkovkrdeo0000](/datasets/md/2e.md#visium-spatial-gene-expression-prostate-gland-gk7zcs0xkovkrdeo0000), [visium-spatial-gene-expression-prostate-gland-y6bynfqkdrrqtlya0000](/datasets/md/68.md#visium-spatial-gene-expression-prostate-gland-y6bynfqkdrrqtlya0000), [visium-spatial-gene-expression-prostate-gland-4drhhx64ptp3xpqd0000](/datasets/md/d0.md#visium-spatial-gene-expression-prostate-gland-4drhhx64ptp3xpqd0000), [visium-spatial-gene-expression-prostate-gland-2e1u9uzou6du7paa0000](/datasets/md/df.md#visium-spatial-gene-expression-prostate-gland-2e1u9uzou6du7paa0000), [visium-spatial-gene-expression-prostate-gland-sqy7y6b7y6b3d4ze0000](/datasets/md/9d.md#visium-spatial-gene-expression-prostate-gland-sqy7y6b7y6b3d4ze0000), [visium-spatial-gene-expression-prostate-gland-wtakbgakdcyvdrm20000](/datasets/md/2a.md#visium-spatial-gene-expression-prostate-gland-wtakbgakdcyvdrm20000), [visium-spatial-gene-expression-prostate-gland-hw8a8syowdxopfgl0000](/datasets/md/cc.md#visium-spatial-gene-expression-prostate-gland-hw8a8syowdxopfgl0000), [visium-spatial-gene-expression-prostate-gland-ioxjjvfp33xhmh2t0000](/datasets/md/c4.md#visium-spatial-gene-expression-prostate-gland-ioxjjvfp33xhmh2t0000), [visium-spatial-gene-expression-prostate-gland-h0oh9ehlogiu0h2e0000](/datasets/md/cc.md#visium-spatial-gene-expression-prostate-gland-h0oh9ehlogiu0h2e0000) ## 10X Visium Spatial transcriptomics of murine colon in steady state and during recovery after DSS colitis - Page: /collections/geo-gse169749/ - Kind: comparison - Datasets: 2 - Reference: PMID:35149721 - Design: Wild type C57BL/6J mice were exposed to DSS in drinking water for 7 days and then allowed to recover for 7 more days. Mouse colonic tissues were collected either on day 0 (without any exposure to DSS) or on day14 after exposure to DSS, Swisrolled and frozen in OCT. Mouse colonic tissues (day0 and day14) were cryo-sectioned (10uM) and placed on the already barcoded spots (6.5mm x 6.5mm) on the glass slide. Samples were processed according to 10X Visium spatial transcriptomics protocol and submitted for sequencing. - Members: [visium-spatial-gene-expression-colon-3lrepyldaf0nvpej0000](/datasets/md/a9.md#visium-spatial-gene-expression-colon-3lrepyldaf0nvpej0000), [visium-spatial-gene-expression-colon-8rvooqy1gj0rmto10000](/datasets/md/03.md#visium-spatial-gene-expression-colon-8rvooqy1gj0rmto10000) ## Epithelial Plasticity and Innate Immune Activation Promote Lung Tissue Remodeling following Respiratory Viral Infection. - Page: /collections/geo-gse184384/ - Kind: other - Datasets: 2 - Reference: PMID:37726288 - Design: Single cell RNAseq was used to assess dynamic changes in gene expression and cell representation at indicated time points following influenza induced acute lung injury (naïve, 3, 5 , 7, 9 , 11, 14, 17, 21, 120, 240). Immune and Epithelial cell were enriched prior to cell capture by FACS. - Members: [visium-spatial-gene-expression-lung-bn75cgakede2tnpc0000](/datasets/md/5e.md#visium-spatial-gene-expression-lung-bn75cgakede2tnpc0000), [visium-spatial-gene-expression-lung-rq6udw2tnzftpqzd0000](/datasets/md/9f.md#visium-spatial-gene-expression-lung-rq6udw2tnzftpqzd0000) ## Spatial transcriptomics of human plastic and non-plastic breast cancer subtypes - Page: /collections/geo-gse213688/ - Kind: comparison - Datasets: 14 - Reference: PMID:37813278 - Design: Fresh frozen tissue slides analysed using the 10X Genomics Visium spatial transcriptomics technology - Members: [visium-spatial-gene-expression-breast-ykcsfkxaqxmzeta00000](/datasets/md/40.md#visium-spatial-gene-expression-breast-ykcsfkxaqxmzeta00000), [visium-spatial-gene-expression-breast-sa3txhqopvfrfwaj0000](/datasets/md/e6.md#visium-spatial-gene-expression-breast-sa3txhqopvfrfwaj0000), [visium-spatial-gene-expression-breast-5jaolmlyxp3za90n0000](/datasets/md/eb.md#visium-spatial-gene-expression-breast-5jaolmlyxp3za90n0000), [visium-spatial-gene-expression-breast-h5hcrauol2cf74es0000](/datasets/md/cb.md#visium-spatial-gene-expression-breast-h5hcrauol2cf74es0000), [visium-spatial-gene-expression-breast-6s561mu5cnjwfvcx0000](/datasets/md/38.md#visium-spatial-gene-expression-breast-6s561mu5cnjwfvcx0000), [visium-spatial-gene-expression-breast-azg7ace6trsdc1pp0000](/datasets/md/6f.md#visium-spatial-gene-expression-breast-azg7ace6trsdc1pp0000), [visium-spatial-gene-expression-breast-kgwomuikhcr55ggx0000](/datasets/md/03.md#visium-spatial-gene-expression-breast-kgwomuikhcr55ggx0000), [visium-spatial-gene-expression-breast-jds6oelojhrcehzm0000](/datasets/md/d2.md#visium-spatial-gene-expression-breast-jds6oelojhrcehzm0000), [visium-spatial-gene-expression-breast-0f6h7aehvu2psiw90000](/datasets/md/13.md#visium-spatial-gene-expression-breast-0f6h7aehvu2psiw90000), [visium-spatial-gene-expression-breast-7sdzopggulp07stq0000](/datasets/md/f4.md#visium-spatial-gene-expression-breast-7sdzopggulp07stq0000), [visium-spatial-gene-expression-breast-xvtnlbrxrtaligdt0000](/datasets/md/d7.md#visium-spatial-gene-expression-breast-xvtnlbrxrtaligdt0000), [visium-spatial-gene-expression-breast-5s474dvkhc1nsazi0000](/datasets/md/2c.md#visium-spatial-gene-expression-breast-5s474dvkhc1nsazi0000), [visium-spatial-gene-expression-breast-b3xmorlwt3g06ent0000](/datasets/md/7d.md#visium-spatial-gene-expression-breast-b3xmorlwt3g06ent0000), [visium-spatial-gene-expression-breast-q17q7ynfei5l3ntx0000](/datasets/md/bd.md#visium-spatial-gene-expression-breast-q17q7ynfei5l3ntx0000) ## scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice - Page: /collections/geo-gse216542/ - Kind: time course - Datasets: 4 - Reference: PMID:39587369 - Design: Mammary gland 3M and 18M old virgin female C57BL/6J mice were enzymatically and mechanically digested. Single cells were FACS-sorted based on viability prior to performing scRNA-seq (10X Chromium v.3 chemistry) and snATAC-seq (10X Chromium v.1) - Members: [visium-spatial-gene-expression-mammary-gland-wvvbuzdgyo4p9kzb0000](/datasets/md/c6.md#visium-spatial-gene-expression-mammary-gland-wvvbuzdgyo4p9kzb0000), [visium-spatial-gene-expression-mammary-gland-ya714sjhczddmzrp0000](/datasets/md/4d.md#visium-spatial-gene-expression-mammary-gland-ya714sjhczddmzrp0000), [visium-spatial-gene-expression-mammary-gland-bwzxram3o5wlnmfu0000](/datasets/md/be.md#visium-spatial-gene-expression-mammary-gland-bwzxram3o5wlnmfu0000), [visium-spatial-gene-expression-mammary-gland-grbuynmaoeqlgpnk0000](/datasets/md/67.md#visium-spatial-gene-expression-mammary-gland-grbuynmaoeqlgpnk0000) ## Spatial transcriptomic analysis of a pre-clinical NF1 pseudarthrosis fracture model - Page: /collections/geo-gse218046/ - Kind: other - Datasets: 2 - Reference: PMID:38990653 - Design: 8-week old control and Postn-cre;Nf1[flox/-] mice underwent distal tibia fracture surgery. Fractures were stabilized with an intramedullary pin. Ten days post-fracture, calluses were harvested, fixed in formallin for 24h, decalcified in 14% EDTA for 3 days prior to embedding in paraffin. Both fracture calluses were embedded together, and two sections through the fracture callus were analyzed using the 10X Genomics Visium spatial transcriptome platform following manufacturer's recommendations. Following sequencing, bioinformatic analyses were conduced using Partek Flow. - Members: [visium-spatial-gene-expression-tibia-dw1dtcxatpwziaeh0000](/datasets/md/22.md#visium-spatial-gene-expression-tibia-dw1dtcxatpwziaeh0000), [visium-spatial-gene-expression-tibia-zxdjq3ha8wueansr0000](/datasets/md/de.md#visium-spatial-gene-expression-tibia-zxdjq3ha8wueansr0000) ## Spatial Transcriptomics of Brains Infected with VEEV - Page: /collections/geo-gse275201/ - Kind: time course - Datasets: 2 - Reference: PMID:39749347 - Design: Spatial transcriptomics was performed on sections of brain prepared from either C3H/HeN mice infected intranasally with VEEV TC-83 at 6 days post-infection or healthy controls. - Members: [visium-spatial-gene-expression-brain-eacukmp2g7eac70y0000](/datasets/md/9e.md#visium-spatial-gene-expression-brain-eacukmp2g7eac70y0000), [visium-spatial-gene-expression-brain-j1xnsoye3fvqdj6s0000](/datasets/md/08.md#visium-spatial-gene-expression-brain-j1xnsoye3fvqdj6s0000) ## Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial] - Page: /collections/geo-gse235315/ - Kind: other - Datasets: 7 - Reference: PMID:38297291 - Design: We performed single cell RNA sequencing using enriched non-immune cell populations from 17 pancreatic cancer tumor tissues, and also generated paired spatial transcriptome data from 7 of the patient samples. - Members: [visium-spatial-gene-expression-pancreas-fbgorhdywfhvibzy0000](/datasets/md/57.md#visium-spatial-gene-expression-pancreas-fbgorhdywfhvibzy0000), [visium-spatial-gene-expression-pancreas-iro7ep655vyrh7mz0000](/datasets/md/d0.md#visium-spatial-gene-expression-pancreas-iro7ep655vyrh7mz0000), [visium-spatial-gene-expression-pancreas-9nwc1vltmglftndd0000](/datasets/md/36.md#visium-spatial-gene-expression-pancreas-9nwc1vltmglftndd0000), [visium-spatial-gene-expression-pancreas-nkunxim1wtoynnnw0000](/datasets/md/63.md#visium-spatial-gene-expression-pancreas-nkunxim1wtoynnnw0000), [visium-spatial-gene-expression-pancreas-uw192iwweg5vhtm70000](/datasets/md/2e.md#visium-spatial-gene-expression-pancreas-uw192iwweg5vhtm70000), [visium-spatial-gene-expression-pancreas-skram7y8bvdpfzh00000](/datasets/md/f1.md#visium-spatial-gene-expression-pancreas-skram7y8bvdpfzh00000), [visium-spatial-gene-expression-pancreas-k8mvhlndoxcgwtfc0000](/datasets/md/e6.md#visium-spatial-gene-expression-pancreas-k8mvhlndoxcgwtfc0000) ## Spatial transcriptomics reveals modulation of transcriptional networks across brain regions after auditory threat conditioning - Page: /collections/geo-gse243140/ - Kind: comparison - Datasets: 15 - Reference: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE243140 - Design: We used auditory threat conditioning in 16 mice, 8 tone control mice and 8 auditory threat conditioned mice. Brain slices were taken at a bregma of -1.8 and all samples were analyzed using Visium spatial transcriptomics. - Members: [visium-spatial-gene-expression-brain-dqd1xpa7uddfpguk0000](/datasets/md/00.md#visium-spatial-gene-expression-brain-dqd1xpa7uddfpguk0000), [visium-spatial-gene-expression-brain-hvhhwdhyz4sk4tma0000](/datasets/md/d9.md#visium-spatial-gene-expression-brain-hvhhwdhyz4sk4tma0000), [visium-spatial-gene-expression-brain-qz22mwqtjsrcx5h90000](/datasets/md/65.md#visium-spatial-gene-expression-brain-qz22mwqtjsrcx5h90000), [visium-spatial-gene-expression-brain-pifr5egzmutswff10000](/datasets/md/54.md#visium-spatial-gene-expression-brain-pifr5egzmutswff10000), [visium-spatial-gene-expression-brain-z5rq84io4gya9brn0000](/datasets/md/42.md#visium-spatial-gene-expression-brain-z5rq84io4gya9brn0000), [visium-spatial-gene-expression-brain-qdfvzdt0b0my6sti0000](/datasets/md/d7.md#visium-spatial-gene-expression-brain-qdfvzdt0b0my6sti0000), [visium-spatial-gene-expression-brain-8pwctjnxxi3lioyn0000](/datasets/md/eb.md#visium-spatial-gene-expression-brain-8pwctjnxxi3lioyn0000), [visium-spatial-gene-expression-brain-wfvt9d1izlg6tbqj0000](/datasets/md/77.md#visium-spatial-gene-expression-brain-wfvt9d1izlg6tbqj0000), [visium-spatial-gene-expression-brain-zgyp6twcrnjhxfww0000](/datasets/md/d7.md#visium-spatial-gene-expression-brain-zgyp6twcrnjhxfww0000), [visium-spatial-gene-expression-brain-y8fqknbyjvo3rsob0000](/datasets/md/71.md#visium-spatial-gene-expression-brain-y8fqknbyjvo3rsob0000), [visium-spatial-gene-expression-brain-k79fcont8ne8j90l0000](/datasets/md/93.md#visium-spatial-gene-expression-brain-k79fcont8ne8j90l0000), [visium-spatial-gene-expression-brain-up4vqo6uovpvw5td0000](/datasets/md/8f.md#visium-spatial-gene-expression-brain-up4vqo6uovpvw5td0000), [visium-spatial-gene-expression-brain-vx3wpkrnyxzpe4f00000](/datasets/md/de.md#visium-spatial-gene-expression-brain-vx3wpkrnyxzpe4f00000), [visium-spatial-gene-expression-brain-o75ioak2kprvsagq0000](/datasets/md/30.md#visium-spatial-gene-expression-brain-o75ioak2kprvsagq0000), [visium-spatial-gene-expression-brain-q2i6betenkwagxev0000](/datasets/md/b5.md#visium-spatial-gene-expression-brain-q2i6betenkwagxev0000) ## Spatial transcriptomics of the achilles tendon harvested from the injury site with and without TrkA neuronal inhibition - Page: /collections/geo-gse245097/ - Kind: comparison - Datasets: 4 - Reference: PMID:38117901 - Design: The injury site was dissected from TrkAWT and TrkAF592A animals at 14 d post-operative for Spatial transcriptomics. Pooled N=4 mice per genotype - Members: [visium-spatial-gene-expression-calcaneal-tendon-kghnu98f284ohr5v0000](/datasets/md/39.md#visium-spatial-gene-expression-calcaneal-tendon-kghnu98f284ohr5v0000), [visium-spatial-gene-expression-calcaneal-tendon-h32tsngialrcqeak0000](/datasets/md/3d.md#visium-spatial-gene-expression-calcaneal-tendon-h32tsngialrcqeak0000), [visium-spatial-gene-expression-calcaneal-tendon-jtwzodb3uc8f91ln0000](/datasets/md/c1.md#visium-spatial-gene-expression-calcaneal-tendon-jtwzodb3uc8f91ln0000), [visium-spatial-gene-expression-calcaneal-tendon-qchfvtmontjbxwod0000](/datasets/md/0c.md#visium-spatial-gene-expression-calcaneal-tendon-qchfvtmontjbxwod0000) ## A Spatially Resolved Transcriptome Landscape during Thyroid Cancer Progression - Page: /collections/geo-gse250521/ - Kind: time course - Datasets: 16 - Reference: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250521 - Design: Specimens collected for single-cell transcriptomics and spatial transcriptomics were from twelves thyroid cancer patients undergoing surgery at Fudan University Shanghai Cancer Center. All the patients signed informed consent before sample collection. In total, 4 para-tumors (N), 4 early thyroid cancer (PTC), 4 locally advanced thyroid cancer (LPTC), and 4 anaplastic thyroid cancer (ATC) were used for spatial transcriptomics. Three out of 4 N, 3 out of 4 PTC, and 3 out of 4 LPTC samples were collected for single-cell transcriptomics. Two experienced pathologists confirmed the pathology of each sample. - Members: [visium-spatial-gene-expression-thyroid-gland-y1juqwdxawcwwwpo0000](/datasets/md/f6.md#visium-spatial-gene-expression-thyroid-gland-y1juqwdxawcwwwpo0000), [visium-spatial-gene-expression-thyroid-gland-i2lku0cclnbacdzq0000](/datasets/md/17.md#visium-spatial-gene-expression-thyroid-gland-i2lku0cclnbacdzq0000), [visium-spatial-gene-expression-thyroid-gland-8lhuacl63gyclfiq0000](/datasets/md/88.md#visium-spatial-gene-expression-thyroid-gland-8lhuacl63gyclfiq0000), [visium-spatial-gene-expression-thyroid-gland-pdhztkzcpu6tre330000](/datasets/md/bf.md#visium-spatial-gene-expression-thyroid-gland-pdhztkzcpu6tre330000), [visium-spatial-gene-expression-thyroid-gland-mi1rmfyflvs68ooo0000](/datasets/md/ef.md#visium-spatial-gene-expression-thyroid-gland-mi1rmfyflvs68ooo0000), [visium-spatial-gene-expression-thyroid-gland-ztzuqsvpb7xn91gs0001](/datasets/md/b7.md#visium-spatial-gene-expression-thyroid-gland-ztzuqsvpb7xn91gs0001), [visium-spatial-gene-expression-thyroid-gland-0bofjw6tijv16acj0000](/datasets/md/4e.md#visium-spatial-gene-expression-thyroid-gland-0bofjw6tijv16acj0000), [visium-spatial-gene-expression-thyroid-gland-ok3svb53t1zckr4f0000](/datasets/md/5c.md#visium-spatial-gene-expression-thyroid-gland-ok3svb53t1zckr4f0000), [visium-spatial-gene-expression-thyroid-gland-rzsog9gnokxq8o4z0000](/datasets/md/96.md#visium-spatial-gene-expression-thyroid-gland-rzsog9gnokxq8o4z0000), [visium-spatial-gene-expression-thyroid-gland-ibychtfgadsgffae0000](/datasets/md/e4.md#visium-spatial-gene-expression-thyroid-gland-ibychtfgadsgffae0000), [visium-spatial-gene-expression-thyroid-gland-iix46i6hzgavrisl0000](/datasets/md/cd.md#visium-spatial-gene-expression-thyroid-gland-iix46i6hzgavrisl0000), [visium-spatial-gene-expression-thyroid-gland-x0b323tfu8djiibk0000](/datasets/md/23.md#visium-spatial-gene-expression-thyroid-gland-x0b323tfu8djiibk0000), [visium-spatial-gene-expression-thyroid-gland-ervjq4uls0v0xkom0000](/datasets/md/4f.md#visium-spatial-gene-expression-thyroid-gland-ervjq4uls0v0xkom0000), [visium-spatial-gene-expression-thyroid-gland-bjdd8bbdekrgw9ir0000](/datasets/md/8f.md#visium-spatial-gene-expression-thyroid-gland-bjdd8bbdekrgw9ir0000), [visium-spatial-gene-expression-thyroid-gland-rr6aelzxn87adw940000](/datasets/md/87.md#visium-spatial-gene-expression-thyroid-gland-rr6aelzxn87adw940000), [visium-spatial-gene-expression-thyroid-gland-fyi9fu4e7yckgsns0000](/datasets/md/72.md#visium-spatial-gene-expression-thyroid-gland-fyi9fu4e7yckgsns0000) ## Safety and reactogenicity of a controlled human infection model of sand fly-transmitted cutaneous leishmaniasis - Page: /collections/geo-gse263298/ - Kind: comparison - Datasets: 12 - Reference: PMID:39095597 - Design: Evaluating a new controlled human infection model of cutaenous leishmaniasis that incorporates natural sand fly transmission. The study was designed with the primary objectives of determining take rate (defined as lesion development) after exposure to infected sand flies and safety in terms of lesion clearance at 12 month follow up. - Members: [visium-spatial-gene-expression-skin-of-body-qarbydlchb0jp5jk0000](/datasets/md/68.md#visium-spatial-gene-expression-skin-of-body-qarbydlchb0jp5jk0000), [visium-spatial-gene-expression-skin-of-body-cs4t1a2gc9plqyha0000](/datasets/md/35.md#visium-spatial-gene-expression-skin-of-body-cs4t1a2gc9plqyha0000), [visium-spatial-gene-expression-skin-of-body-yg1pdcxcppdftg650000](/datasets/md/cc.md#visium-spatial-gene-expression-skin-of-body-yg1pdcxcppdftg650000), [visium-spatial-gene-expression-skin-of-body-eubj6rgjyraro2en0000](/datasets/md/bb.md#visium-spatial-gene-expression-skin-of-body-eubj6rgjyraro2en0000), [visium-spatial-gene-expression-skin-of-body-bllef0eipdyma9lw0000](/datasets/md/30.md#visium-spatial-gene-expression-skin-of-body-bllef0eipdyma9lw0000), [visium-spatial-gene-expression-skin-of-body-r7qsli06haa1oepo0000](/datasets/md/c1.md#visium-spatial-gene-expression-skin-of-body-r7qsli06haa1oepo0000), [visium-spatial-gene-expression-skin-of-body-s8m08qybulycymbb0000](/datasets/md/c7.md#visium-spatial-gene-expression-skin-of-body-s8m08qybulycymbb0000), [visium-spatial-gene-expression-skin-of-body-cdorjrgxxpgqmsxu0000](/datasets/md/d6.md#visium-spatial-gene-expression-skin-of-body-cdorjrgxxpgqmsxu0000), [visium-spatial-gene-expression-skin-of-body-jhuykyejypomkh790000](/datasets/md/e1.md#visium-spatial-gene-expression-skin-of-body-jhuykyejypomkh790000), [visium-spatial-gene-expression-skin-of-body-imoqdccait2x9wm30000](/datasets/md/6d.md#visium-spatial-gene-expression-skin-of-body-imoqdccait2x9wm30000), [visium-spatial-gene-expression-skin-of-body-fdqihwzuqvwgcx8n0000](/datasets/md/6e.md#visium-spatial-gene-expression-skin-of-body-fdqihwzuqvwgcx8n0000), [visium-spatial-gene-expression-skin-of-body-f3tycudjnpeie1m90000](/datasets/md/90.md#visium-spatial-gene-expression-skin-of-body-f3tycudjnpeie1m90000) ## 10X Visium Spatial transcriptomics of murine small intestine 6 and 14 days post Heligmosomoides polygyrus infection with or without LXR agonist GW3965 - Page: /collections/geo-gse266136/ - Kind: comparison - Datasets: 4 - Reference: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266136 - Design: Wild type male C57BL/6JRj mice purchased from Janvier-lab were under standard of GW3965 diet for 10 days then mice were infected with 200 L3 Heligmosomoides polygyrus via oral gavage. At day 6 and day 14 post infection, proximal small intestine (4~6cm) was collected from each mouse. To prepare the swissroll, the small intestine was rolled from the proximal to the distal and frozen in OCT. Cryo-sectioned (10µm) and placed on the 10X visium provided slide with a barcoded square (6.5mm x 6.5mm). Libraries were prepared according to 10X Visium spatial transcriptomics protocol and submitted for sequensing - Members: [visium-spatial-gene-expression-small-intestine-rzfcvvrvin6do5bw0000](/datasets/md/84.md#visium-spatial-gene-expression-small-intestine-rzfcvvrvin6do5bw0000), [visium-spatial-gene-expression-small-intestine-vlg8ivgib2do4zdd0000](/datasets/md/71.md#visium-spatial-gene-expression-small-intestine-vlg8ivgib2do4zdd0000), [visium-spatial-gene-expression-small-intestine-eibczijycqofwyhk0000](/datasets/md/71.md#visium-spatial-gene-expression-small-intestine-eibczijycqofwyhk0000), [visium-spatial-gene-expression-small-intestine-zioweiv3hy8v8vye0000](/datasets/md/27.md#visium-spatial-gene-expression-small-intestine-zioweiv3hy8v8vye0000) ## Spatial transcriptomics unveils the in situ cellular and molecular hallmarks of the lung in fatal COVID-19 - Page: /collections/geo-gse271370/ - Kind: comparison - Datasets: 22 - Reference: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE271370 - Design: We leveraged the recently developed Visium spatial transcriptomics (VisiumST) technology in a cohort of 23 lungs, including those with normal histology (n=4) and those that underwent DAD upon the course of fatal COVID-19 (n=19). To further untangle the precise and topographically located gene expression changes underlying the disease, both acute (n=7) and proliferative (n=12) stages of DAD were studied using the single-cell RNA expression data of a human cell atlas of the lung to annotate cell types. - Members: [visium-spatial-gene-expression-lung-f0tmdlgvuqhr5erp0000](/datasets/md/9e.md#visium-spatial-gene-expression-lung-f0tmdlgvuqhr5erp0000), [visium-spatial-gene-expression-lung-n7u4ozdvst65t7se0000](/datasets/md/31.md#visium-spatial-gene-expression-lung-n7u4ozdvst65t7se0000), [visium-spatial-gene-expression-lung-mbpw4hjmeynpsmqj0000](/datasets/md/15.md#visium-spatial-gene-expression-lung-mbpw4hjmeynpsmqj0000), [visium-spatial-gene-expression-lung-8tqcyq3a7chpijjr0000](/datasets/md/b0.md#visium-spatial-gene-expression-lung-8tqcyq3a7chpijjr0000), [visium-spatial-gene-expression-lung-pwhfove6bgtx9p7f0000](/datasets/md/8a.md#visium-spatial-gene-expression-lung-pwhfove6bgtx9p7f0000), [visium-spatial-gene-expression-lung-bwk1hemj9kzbxffa0000](/datasets/md/d3.md#visium-spatial-gene-expression-lung-bwk1hemj9kzbxffa0000), [visium-spatial-gene-expression-lung-wlqb4wjx1cnj2ggs0000](/datasets/md/eb.md#visium-spatial-gene-expression-lung-wlqb4wjx1cnj2ggs0000), [visium-spatial-gene-expression-lung-u68yyqio7sfasgqv0000](/datasets/md/ca.md#visium-spatial-gene-expression-lung-u68yyqio7sfasgqv0000), [visium-spatial-gene-expression-lung-qlumhlxvuqe3ileb0000](/datasets/md/72.md#visium-spatial-gene-expression-lung-qlumhlxvuqe3ileb0000), [visium-spatial-gene-expression-lung-l0svmktfuuzawxdw0000](/datasets/md/76.md#visium-spatial-gene-expression-lung-l0svmktfuuzawxdw0000), [visium-spatial-gene-expression-lung-cjhsk1sjee42pnnb0000](/datasets/md/fa.md#visium-spatial-gene-expression-lung-cjhsk1sjee42pnnb0000), [visium-spatial-gene-expression-lung-1wqo5hzf9uddvxqu0000](/datasets/md/e3.md#visium-spatial-gene-expression-lung-1wqo5hzf9uddvxqu0000), [visium-spatial-gene-expression-lung-cyqw6ucknh3nqmlj0000](/datasets/md/5d.md#visium-spatial-gene-expression-lung-cyqw6ucknh3nqmlj0000), [visium-spatial-gene-expression-lung-g89shel9fl2zfdjk0000](/datasets/md/26.md#visium-spatial-gene-expression-lung-g89shel9fl2zfdjk0000), [visium-spatial-gene-expression-lung-empsa6owib8ftxg80000](/datasets/md/e9.md#visium-spatial-gene-expression-lung-empsa6owib8ftxg80000), [visium-spatial-gene-expression-lung-yibjobcjwoah0qa40000](/datasets/md/5d.md#visium-spatial-gene-expression-lung-yibjobcjwoah0qa40000), [visium-spatial-gene-expression-lung-bs6nmwhjgwnepdqz0000](/datasets/md/eb.md#visium-spatial-gene-expression-lung-bs6nmwhjgwnepdqz0000), [visium-spatial-gene-expression-lung-kbvvd00wyprrbvid0000](/datasets/md/09.md#visium-spatial-gene-expression-lung-kbvvd00wyprrbvid0000), [visium-spatial-gene-expression-lung-shg6d1wegxy8wdlw0000](/datasets/md/7c.md#visium-spatial-gene-expression-lung-shg6d1wegxy8wdlw0000), [visium-spatial-gene-expression-lung-njh1fwffx80jwpyt0000](/datasets/md/d8.md#visium-spatial-gene-expression-lung-njh1fwffx80jwpyt0000), [visium-spatial-gene-expression-lung-epsxjihnzllfr3dv0000](/datasets/md/89.md#visium-spatial-gene-expression-lung-epsxjihnzllfr3dv0000), [visium-spatial-gene-expression-lung-8bl9ge6i40r6ywlj0000](/datasets/md/c1.md#visium-spatial-gene-expression-lung-8bl9ge6i40r6ywlj0000) ## Spatial transcriptomics for platinum-resistant high-grade serous ovarian carcinoma - Page: /collections/geo-gse274657/ - Kind: replicates - Datasets: 3 - Reference: PMID:40883550 - Design: Archival Formalin-fixed paraffin embedded (FFPE) tissues at the Hyogo Prefectural Cancer Center Biobank were used for analysis. The expression of JAK1 was confirmed by immunohistochemistry. According to the Visium FFPE protocol, the spatial transcriptome analysis was conducted by CyberomiX (Kyoto, Japan). - Members: [visium-spatial-gene-expression-ovary-dnh4rl9znrkbxtk50000](/datasets/md/c8.md#visium-spatial-gene-expression-ovary-dnh4rl9znrkbxtk50000), [visium-spatial-gene-expression-ovary-g2nud5mvrzkfvawj0000](/datasets/md/26.md#visium-spatial-gene-expression-ovary-g2nud5mvrzkfvawj0000), [visium-spatial-gene-expression-ovary-3vishk4ciyc30vje0000](/datasets/md/79.md#visium-spatial-gene-expression-ovary-3vishk4ciyc30vje0000) ## Spatially-resolved molecular sex differences at single cell resolution in the adult human hypothalamus - Page: /collections/geo-gse280316/ - Kind: other - Datasets: 10 - Reference: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE280316 - Design: We obtained tissue blocks of postmortem human brain containing hypothalamus from 4 male and 4 female neurotypical adult brain donors. We used the 10x Genomics Visium and Xenium platforms to generate spatial transcriptomics of the tuberal (ventromedial portion) of the hypothalamus to profile VMH and ARC in particular. Genes selected for profiling with Xenium included the 10x human brain 'base panel' and 100 custom-selected genes based on marker, sex DE, and spatial variability analyses of Visium data, along with candidate genes from the literature reported to mark cell types or spatial subdivisions of VMH/ARC. - Members: [visium-spatial-gene-expression-hypothalamus-sclmbehmurpdjv6c0001](/datasets/md/f6.md#visium-spatial-gene-expression-hypothalamus-sclmbehmurpdjv6c0001), [visium-spatial-gene-expression-hypothalamus-l46tnlgo8glghtgd0000](/datasets/md/e7.md#visium-spatial-gene-expression-hypothalamus-l46tnlgo8glghtgd0000), [visium-spatial-gene-expression-hypothalamus-fjtzymyl90sltdeu0000](/datasets/md/ad.md#visium-spatial-gene-expression-hypothalamus-fjtzymyl90sltdeu0000), [visium-spatial-gene-expression-hypothalamus-0unp6yjeuiyto7ns0000](/datasets/md/73.md#visium-spatial-gene-expression-hypothalamus-0unp6yjeuiyto7ns0000), [visium-spatial-gene-expression-hypothalamus-p6kciz80wfrnryra0000](/datasets/md/8a.md#visium-spatial-gene-expression-hypothalamus-p6kciz80wfrnryra0000), [visium-spatial-gene-expression-hypothalamus-rsmxic3eri8kqtsp0000](/datasets/md/ab.md#visium-spatial-gene-expression-hypothalamus-rsmxic3eri8kqtsp0000), [visium-spatial-gene-expression-hypothalamus-vp1ttikezyqmycbg0000](/datasets/md/83.md#visium-spatial-gene-expression-hypothalamus-vp1ttikezyqmycbg0000), [visium-spatial-gene-expression-hypothalamus-ujihum3siufmrn3f0000](/datasets/md/c4.md#visium-spatial-gene-expression-hypothalamus-ujihum3siufmrn3f0000), [visium-spatial-gene-expression-hypothalamus-cn4jbitinbbqyuxk0000](/datasets/md/21.md#visium-spatial-gene-expression-hypothalamus-cn4jbitinbbqyuxk0000), [visium-spatial-gene-expression-hypothalamus-y0kfhvktoavlpt2r0000](/datasets/md/72.md#visium-spatial-gene-expression-hypothalamus-y0kfhvktoavlpt2r0000) ## Integrated single-cell and spatial analysis identifies context-dependent myeloid-T cell interactions in head and neck cancer immune checkpoint blockade response - Page: /collections/geo-gse301720/ - Kind: comparison - Datasets: 8 - Reference: PMID:41837744 - Design: Spatial transcriptomic profiling using 10X Visium was performed on 8 head and neck cancer patient samples for identification of cellular communities and communication that differentiates immunotherapy responders and non-responders - Members: [visium-spatial-gene-expression-oropharynx-xnlzqxbycc6xqsu10000](/datasets/md/08.md#visium-spatial-gene-expression-oropharynx-xnlzqxbycc6xqsu10000), [visium-spatial-gene-expression-oropharynx-fpjtagpvxvprtnak0000](/datasets/md/a7.md#visium-spatial-gene-expression-oropharynx-fpjtagpvxvprtnak0000), [visium-spatial-gene-expression-oral-cavity-komjvgdt7gf2pn030000](/datasets/md/b6.md#visium-spatial-gene-expression-oral-cavity-komjvgdt7gf2pn030000), [visium-spatial-gene-expression-oropharynx-acf3tsjfsw4pl1xv0000](/datasets/md/d1.md#visium-spatial-gene-expression-oropharynx-acf3tsjfsw4pl1xv0000), [visium-spatial-gene-expression-oropharynx-jvbhbzznm4yvgwwa0000](/datasets/md/08.md#visium-spatial-gene-expression-oropharynx-jvbhbzznm4yvgwwa0000), [visium-spatial-gene-expression-oropharynx-25ad8gsvjakev4th0000](/datasets/md/a4.md#visium-spatial-gene-expression-oropharynx-25ad8gsvjakev4th0000), [visium-spatial-gene-expression-oropharynx-qr0oo4eggdkyoydd0000](/datasets/md/81.md#visium-spatial-gene-expression-oropharynx-qr0oo4eggdkyoydd0000), [visium-spatial-gene-expression-nasal-cavity-khzzw9w5yxpaei0g0000](/datasets/md/a7.md#visium-spatial-gene-expression-nasal-cavity-khzzw9w5yxpaei0g0000) ## Spatial Transcriptomic Analysis of Mouse Parathyroid Gland Cells Expressing an Activating Variant of Gcm2 - Page: /collections/geo-gse298115/ - Kind: comparison - Datasets: 8 - Reference: PMID:41025096 - Design: FFPE fixed mouse parathyroid tissue from WT or Gcm2 variant p.Y392S isolated from male and female mice in 4 replicates each, processed with the 10x Visium probe-based spatial transcriptome capture profiling - Members: [visium-spatial-gene-expression-parathyroid-gland-0bh4k9sft7qi8xss0000](/datasets/md/bc.md#visium-spatial-gene-expression-parathyroid-gland-0bh4k9sft7qi8xss0000), [visium-spatial-gene-expression-parathyroid-gland-5uky54h1nlnqfcnw0000](/datasets/md/a8.md#visium-spatial-gene-expression-parathyroid-gland-5uky54h1nlnqfcnw0000), [visium-spatial-gene-expression-parathyroid-gland-y4mua48iimanrtmp0000](/datasets/md/0c.md#visium-spatial-gene-expression-parathyroid-gland-y4mua48iimanrtmp0000), [visium-spatial-gene-expression-parathyroid-gland-w6jhxlhwvy6bavw40000](/datasets/md/ec.md#visium-spatial-gene-expression-parathyroid-gland-w6jhxlhwvy6bavw40000), [visium-spatial-gene-expression-parathyroid-gland-7bq19tpprsvnvbmt0000](/datasets/md/2f.md#visium-spatial-gene-expression-parathyroid-gland-7bq19tpprsvnvbmt0000), [visium-spatial-gene-expression-parathyroid-gland-kzr7r2jnbbfl9nqf0000](/datasets/md/82.md#visium-spatial-gene-expression-parathyroid-gland-kzr7r2jnbbfl9nqf0000), [visium-spatial-gene-expression-parathyroid-gland-6kfnys0jprn9zk7f0000](/datasets/md/58.md#visium-spatial-gene-expression-parathyroid-gland-6kfnys0jprn9zk7f0000), [visium-spatial-gene-expression-parathyroid-gland-c0lk4laugnqnhk4g0000](/datasets/md/e2.md#visium-spatial-gene-expression-parathyroid-gland-c0lk4laugnqnhk4g0000) ## Genetic deletion of Usp22 in KRASG12D-p53-null driven mouse lung cancer [Visium] - Page: /collections/geo-gse306019/ - Kind: comparison - Datasets: 2 - Reference: PMID:42707650 - Design: Mouse KRASG12D; p53−/− (KP) lung tumors with or without Usp22 knockout (KPU-) were analyzed using 10X Visium spatial transcriptomics according to user manual of the 10X Kit. - Members: [visium-spatial-gene-expression-lung-u6hzp3lagmz4we7z0000](/datasets/md/11.md#visium-spatial-gene-expression-lung-u6hzp3lagmz4we7z0000), [visium-spatial-gene-expression-lung-f3z6mhlynutu16gi0000](/datasets/md/d4.md#visium-spatial-gene-expression-lung-f3z6mhlynutu16gi0000) ## Spatial transcriptomics profiling of NDMA-induced liver injury in Mgmt-deficient mice across sex and time - Page: /collections/geo-gse332601/ - Kind: comparison - Datasets: 4 - Reference: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE332601 - Design: Juvenile mice (genotype RaDR+/+; GPT+/+; Mgmt-/-) received intraperitoneal injections of NDMA (3.5 mg/kg at postnatal day 8, 7 mg/kg at postnatal day 15) or equivalent volumes of saline vehicle. Liver left lobe tissue was collected at 10 weeks or 10 months of age, embedded in OCT, cryosectioned, and processed for 10x Visium spatial transcriptomics. The design includes NDMA-treated males (10 week, n=3), NDMA-treated females (10 week, n=3), saline-treated controls (10 week, n=2), NDMA-treated males (10 month, n=3), and saline-treated control (10 month, n=1). - Members: [visium-spatial-gene-expression-left-lobe-of-liver-5c7y5tlnsiywkxga0000](/datasets/md/27.md#visium-spatial-gene-expression-left-lobe-of-liver-5c7y5tlnsiywkxga0000), [visium-spatial-gene-expression-left-lobe-of-liver-lywxef7jnydqummy0000](/datasets/md/52.md#visium-spatial-gene-expression-left-lobe-of-liver-lywxef7jnydqummy0000), [visium-spatial-gene-expression-left-lobe-of-liver-o3kwjv4qcfuakws60000](/datasets/md/b1.md#visium-spatial-gene-expression-left-lobe-of-liver-o3kwjv4qcfuakws60000), [visium-spatial-gene-expression-left-lobe-of-liver-ob8pt4vjcb4jd2mv0000](/datasets/md/37.md#visium-spatial-gene-expression-left-lobe-of-liver-ob8pt4vjcb4jd2mv0000) ## Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles - Page: /collections/geo-gse333401/ - Kind: comparison - Datasets: 12 - Reference: PMID:42523464 - Design: GD18.5 mice placentas of female and male fetuses from control and DBP exposed animals are included in this study. Control female (CT-F, n=4), control male (CT-M, n=3), DBP exposed female (DBP, n=3), DBP exposed male (DBP-M, n=3). Each placenta from a different dam. - Members: [visium-spatial-gene-expression-placenta-l7krnswr5kd865up0000](/datasets/md/95.md#visium-spatial-gene-expression-placenta-l7krnswr5kd865up0000), [visium-spatial-gene-expression-placenta-tfnh95ztalfksp7h0000](/datasets/md/6d.md#visium-spatial-gene-expression-placenta-tfnh95ztalfksp7h0000), [visium-spatial-gene-expression-placenta-2rsknt0ogvbatjda0000](/datasets/md/53.md#visium-spatial-gene-expression-placenta-2rsknt0ogvbatjda0000), [visium-spatial-gene-expression-placenta-uketjurfbt8dxcrb0000](/datasets/md/fc.md#visium-spatial-gene-expression-placenta-uketjurfbt8dxcrb0000), [visium-spatial-gene-expression-placenta-atwmsrzjjfd2itjl0000](/datasets/md/2b.md#visium-spatial-gene-expression-placenta-atwmsrzjjfd2itjl0000), [visium-spatial-gene-expression-placenta-sbghkz79jpmrtyeo0000](/datasets/md/b2.md#visium-spatial-gene-expression-placenta-sbghkz79jpmrtyeo0000), [visium-spatial-gene-expression-placenta-j1og9ngxwhkdt6fm0000](/datasets/md/80.md#visium-spatial-gene-expression-placenta-j1og9ngxwhkdt6fm0000), [visium-spatial-gene-expression-placenta-4ngzx9tgwto6xmal0000](/datasets/md/29.md#visium-spatial-gene-expression-placenta-4ngzx9tgwto6xmal0000), [visium-spatial-gene-expression-placenta-spwe4dqf80x4bi350000](/datasets/md/27.md#visium-spatial-gene-expression-placenta-spwe4dqf80x4bi350000), [visium-spatial-gene-expression-placenta-59jm9nb19gregodg0000](/datasets/md/98.md#visium-spatial-gene-expression-placenta-59jm9nb19gregodg0000), [visium-spatial-gene-expression-placenta-wlcpy9jm8youzdcw0000](/datasets/md/70.md#visium-spatial-gene-expression-placenta-wlcpy9jm8youzdcw0000), [visium-spatial-gene-expression-placenta-9n5qa2itnj6mshmo0000](/datasets/md/22.md#visium-spatial-gene-expression-placenta-9n5qa2itnj6mshmo0000) ## Molecularly defined and spatially resolved cell atlas of the whole mouse brain. - Page: /collections/abc-zhuang-abca-1/ - Kind: publication - Datasets: 147 - Reference: 10.1038/s41586-023-06808-9 - Members: [merfish-brain-syv1xugm5cgaqyb90000](/datasets/md/67.md#merfish-brain-syv1xugm5cgaqyb90000), [merfish-brain-az9trualg6t0tjfu0000](/datasets/md/ac.md#merfish-brain-az9trualg6t0tjfu0000), [merfish-brain-5gbphmhxpaf4l9in0000](/datasets/md/d9.md#merfish-brain-5gbphmhxpaf4l9in0000), [merfish-brain-ieqpy6ukkigppwam0000](/datasets/md/f3.md#merfish-brain-ieqpy6ukkigppwam0000), [merfish-brain-mc5tw7emlp5lijls0000](/datasets/md/b9.md#merfish-brain-mc5tw7emlp5lijls0000), [merfish-brain-r3rkbhvtknv9hvkq0000](/datasets/md/19.md#merfish-brain-r3rkbhvtknv9hvkq0000), [merfish-brain-qxqkpp2l7kcafzrs0000](/datasets/md/16.md#merfish-brain-qxqkpp2l7kcafzrs0000), [merfish-brain-nhmn4vjpizzpmx2e0000](/datasets/md/04.md#merfish-brain-nhmn4vjpizzpmx2e0000), [merfish-brain-6rmv2qsuvpvq5vob0000](/datasets/md/cf.md#merfish-brain-6rmv2qsuvpvq5vob0000), [merfish-brain-slymok4gmnzwxfxz0000](/datasets/md/3e.md#merfish-brain-slymok4gmnzwxfxz0000), [merfish-brain-u5t35lwop8wuv0lx0000](/datasets/md/f7.md#merfish-brain-u5t35lwop8wuv0lx0000), [merfish-brain-2dodaahdnljdanph0000](/datasets/md/bb.md#merfish-brain-2dodaahdnljdanph0000), [merfish-brain-paobzoekep4t0j9v0000](/datasets/md/51.md#merfish-brain-paobzoekep4t0j9v0000), [merfish-brain-uucu7vpd3ckeclji0000](/datasets/md/95.md#merfish-brain-uucu7vpd3ckeclji0000), [merfish-brain-forwaydnogzn8n7j0000](/datasets/md/fd.md#merfish-brain-forwaydnogzn8n7j0000), [merfish-brain-otwkfx4mevvfgrnt0000](/datasets/md/42.md#merfish-brain-otwkfx4mevvfgrnt0000), [merfish-brain-tqu1eqatsosr0uuv0000](/datasets/md/27.md#merfish-brain-tqu1eqatsosr0uuv0000), [merfish-brain-wn0ylzfqtzfqgpla0000](/datasets/md/ba.md#merfish-brain-wn0ylzfqtzfqgpla0000), [merfish-brain-1xv61pqmjzuxumti0000](/datasets/md/a7.md#merfish-brain-1xv61pqmjzuxumti0000), [merfish-brain-qwkhwaffx6ikzs700000](/datasets/md/82.md#merfish-brain-qwkhwaffx6ikzs700000), [merfish-brain-vzojzgnp5c5c8rix0000](/datasets/md/b8.md#merfish-brain-vzojzgnp5c5c8rix0000), [merfish-brain-8jl5vqs411b53nyj0000](/datasets/md/7d.md#merfish-brain-8jl5vqs411b53nyj0000), [merfish-brain-ojr542cakaibj6qs0000](/datasets/md/51.md#merfish-brain-ojr542cakaibj6qs0000), [merfish-brain-q3j58bf2ngpwxrgx0000](/datasets/md/a2.md#merfish-brain-q3j58bf2ngpwxrgx0000), [merfish-brain-aq1yvsomrqutid6p0000](/datasets/md/34.md#merfish-brain-aq1yvsomrqutid6p0000), [merfish-brain-jgmko3drrkpijqdb0000](/datasets/md/69.md#merfish-brain-jgmko3drrkpijqdb0000), [merfish-brain-qao4calsblcl0zh60000](/datasets/md/c7.md#merfish-brain-qao4calsblcl0zh60000), [merfish-brain-tcdxthjgh7q2sye30000](/datasets/md/69.md#merfish-brain-tcdxthjgh7q2sye30000), [merfish-brain-hp1d9bd3cukaju2r0000](/datasets/md/1d.md#merfish-brain-hp1d9bd3cukaju2r0000), [merfish-brain-vgaphsiontz0pjkf0000](/datasets/md/8f.md#merfish-brain-vgaphsiontz0pjkf0000), [merfish-brain-otjums7ahumqeeha0000](/datasets/md/eb.md#merfish-brain-otjums7ahumqeeha0000), [merfish-brain-6usvljryjdlm9mgv0000](/datasets/md/c2.md#merfish-brain-6usvljryjdlm9mgv0000), [merfish-brain-6j4cinqdhczyfy1r0000](/datasets/md/09.md#merfish-brain-6j4cinqdhczyfy1r0000), [merfish-brain-g0fynajdqmcmo6wr0000](/datasets/md/ea.md#merfish-brain-g0fynajdqmcmo6wr0000), [merfish-brain-9m3csoivrnffasy00000](/datasets/md/f2.md#merfish-brain-9m3csoivrnffasy00000), [merfish-brain-7t6msmtjdcldllav0000](/datasets/md/93.md#merfish-brain-7t6msmtjdcldllav0000), [merfish-brain-oeugkdkxnj3niigf0000](/datasets/md/ac.md#merfish-brain-oeugkdkxnj3niigf0000), [merfish-brain-wzwih8xytcxbeu1e0000](/datasets/md/b2.md#merfish-brain-wzwih8xytcxbeu1e0000), [merfish-brain-f59de6hrfhcxh8cr0000](/datasets/md/ec.md#merfish-brain-f59de6hrfhcxh8cr0000), [merfish-brain-bn7eqozk0mmgbzfk0000](/datasets/md/72.md#merfish-brain-bn7eqozk0mmgbzfk0000), [merfish-brain-l4trryfa2jngsa7n0000](/datasets/md/82.md#merfish-brain-l4trryfa2jngsa7n0000), [merfish-brain-4nt12f8qvxdznilm0000](/datasets/md/1d.md#merfish-brain-4nt12f8qvxdznilm0000), [merfish-brain-paynlvqb2thmxd9n0000](/datasets/md/f9.md#merfish-brain-paynlvqb2thmxd9n0000), [merfish-brain-k0upqwby8z2bi5vf0000](/datasets/md/92.md#merfish-brain-k0upqwby8z2bi5vf0000), [merfish-brain-qb7ppgetwyzz1dqg0000](/datasets/md/5e.md#merfish-brain-qb7ppgetwyzz1dqg0000), [merfish-brain-3gsmdumpzkqudsel0000](/datasets/md/8c.md#merfish-brain-3gsmdumpzkqudsel0000), [merfish-brain-3raopbqw4ttnz5pu0000](/datasets/md/37.md#merfish-brain-3raopbqw4ttnz5pu0000), [merfish-brain-nwjffzincxnm7plb0000](/datasets/md/69.md#merfish-brain-nwjffzincxnm7plb0000), [merfish-brain-lt1bjyvf3yxeb00q0000](/datasets/md/9e.md#merfish-brain-lt1bjyvf3yxeb00q0000), [merfish-brain-zimvlo4wlv8hhvuu0000](/datasets/md/8c.md#merfish-brain-zimvlo4wlv8hhvuu0000), [merfish-brain-a2pgu8g1sbytcbzn0000](/datasets/md/87.md#merfish-brain-a2pgu8g1sbytcbzn0000), [merfish-brain-tu0aqubwrwlatyfh0000](/datasets/md/98.md#merfish-brain-tu0aqubwrwlatyfh0000), [merfish-brain-qy9kujiehxb0pket0000](/datasets/md/78.md#merfish-brain-qy9kujiehxb0pket0000), [merfish-brain-63mp8rneiqqtkxri0000](/datasets/md/fc.md#merfish-brain-63mp8rneiqqtkxri0000), [merfish-brain-6gtuzzkjoioycrcd0000](/datasets/md/5b.md#merfish-brain-6gtuzzkjoioycrcd0000), [merfish-brain-epzupq0dxwjteqsp0000](/datasets/md/b9.md#merfish-brain-epzupq0dxwjteqsp0000), [merfish-brain-skkaixnvfqa56nhp0000](/datasets/md/c1.md#merfish-brain-skkaixnvfqa56nhp0000), [merfish-brain-1qdc9bc1kjj5yspg0000](/datasets/md/96.md#merfish-brain-1qdc9bc1kjj5yspg0000), [merfish-brain-9lwpfn5m4f9qieho0000](/datasets/md/29.md#merfish-brain-9lwpfn5m4f9qieho0000), [merfish-brain-qrb5s07qrpuffsne0000](/datasets/md/88.md#merfish-brain-qrb5s07qrpuffsne0000), [merfish-brain-imrftc9kf0qh7ptq0000](/datasets/md/a0.md#merfish-brain-imrftc9kf0qh7ptq0000), [merfish-brain-f008j0rv5ekpflhn0000](/datasets/md/be.md#merfish-brain-f008j0rv5ekpflhn0000), [merfish-brain-wrib2mtzupsfkscl0000](/datasets/md/6f.md#merfish-brain-wrib2mtzupsfkscl0000), [merfish-brain-qioesku11dw2di9p0000](/datasets/md/42.md#merfish-brain-qioesku11dw2di9p0000), [merfish-brain-sly74tsqvxhdvhpj0000](/datasets/md/2f.md#merfish-brain-sly74tsqvxhdvhpj0000), [merfish-brain-m9qpj4dcqqzrhvcq0000](/datasets/md/73.md#merfish-brain-m9qpj4dcqqzrhvcq0000), [merfish-brain-lgrvuprdrugoqut40000](/datasets/md/4b.md#merfish-brain-lgrvuprdrugoqut40000), [merfish-brain-qnn4tqwlyat5y1o40000](/datasets/md/de.md#merfish-brain-qnn4tqwlyat5y1o40000), [merfish-brain-tzix9eugedgkmvxq0000](/datasets/md/29.md#merfish-brain-tzix9eugedgkmvxq0000), [merfish-brain-ml9s6ueva7c33ihj0000](/datasets/md/21.md#merfish-brain-ml9s6ueva7c33ihj0000), [merfish-brain-nz3zxrlgvcgihsz20000](/datasets/md/14.md#merfish-brain-nz3zxrlgvcgihsz20000), [merfish-brain-snsf5f65r7azaziw0000](/datasets/md/00.md#merfish-brain-snsf5f65r7azaziw0000), [merfish-brain-25riuor2e2ekvgov0000](/datasets/md/ec.md#merfish-brain-25riuor2e2ekvgov0000), [merfish-brain-cikl01mcm95clg7l0000](/datasets/md/38.md#merfish-brain-cikl01mcm95clg7l0000), [merfish-brain-tqyqrl1dfodhwgmf0000](/datasets/md/7b.md#merfish-brain-tqyqrl1dfodhwgmf0000), [merfish-brain-lhscos76t9enuc8i0000](/datasets/md/37.md#merfish-brain-lhscos76t9enuc8i0000), [merfish-brain-zpffws0kbmtm8qqy0000](/datasets/md/06.md#merfish-brain-zpffws0kbmtm8qqy0000), [merfish-brain-6izkqt0m6wph9rhy0000](/datasets/md/33.md#merfish-brain-6izkqt0m6wph9rhy0000), [merfish-brain-lrgcyghbxxk1ruzi0000](/datasets/md/c2.md#merfish-brain-lrgcyghbxxk1ruzi0000), [merfish-brain-0secldahnlrmduxl0000](/datasets/md/94.md#merfish-brain-0secldahnlrmduxl0000), [merfish-brain-s7wlobr8fpayaisf0000](/datasets/md/b7.md#merfish-brain-s7wlobr8fpayaisf0000), [merfish-brain-qnmxrw16ogxcakf50000](/datasets/md/d5.md#merfish-brain-qnmxrw16ogxcakf50000), [merfish-brain-s3ob8b1tlgghvrv90000](/datasets/md/e0.md#merfish-brain-s3ob8b1tlgghvrv90000), [merfish-brain-vplna4zeddpphjxd0000](/datasets/md/c2.md#merfish-brain-vplna4zeddpphjxd0000), [merfish-brain-8l1sjql12roulubd0000](/datasets/md/f4.md#merfish-brain-8l1sjql12roulubd0000), [merfish-brain-ffrzvas7s0rjfjxr0000](/datasets/md/cd.md#merfish-brain-ffrzvas7s0rjfjxr0000), [merfish-brain-auqh6uvojaend7yz0000](/datasets/md/6c.md#merfish-brain-auqh6uvojaend7yz0000), [merfish-brain-raoklu41dqktjrhx0000](/datasets/md/61.md#merfish-brain-raoklu41dqktjrhx0000), [merfish-brain-biugounmpebiqazf0000](/datasets/md/93.md#merfish-brain-biugounmpebiqazf0000), [merfish-brain-yklgyumeyryyztpc0000](/datasets/md/08.md#merfish-brain-yklgyumeyryyztpc0000), [merfish-brain-a1vebwc4kkhaimtu0000](/datasets/md/bd.md#merfish-brain-a1vebwc4kkhaimtu0000), [merfish-brain-fdsueg3bwsocmj5g0000](/datasets/md/4d.md#merfish-brain-fdsueg3bwsocmj5g0000), [merfish-brain-7yhxxozlw9t7nahx0000](/datasets/md/16.md#merfish-brain-7yhxxozlw9t7nahx0000), [merfish-brain-tmvcbjahxgdppaaq0000](/datasets/md/c1.md#merfish-brain-tmvcbjahxgdppaaq0000), [merfish-brain-mepiemwvzlyeslab0000](/datasets/md/b2.md#merfish-brain-mepiemwvzlyeslab0000), [merfish-brain-ycy4shuaegmlr70e0000](/datasets/md/c9.md#merfish-brain-ycy4shuaegmlr70e0000), [merfish-brain-kqim14gw2vlv0pnw0000](/datasets/md/3e.md#merfish-brain-kqim14gw2vlv0pnw0000), [merfish-brain-5mr4oauh0hqbguib0000](/datasets/md/e1.md#merfish-brain-5mr4oauh0hqbguib0000), [merfish-brain-brotqfvuiwcymblv0000](/datasets/md/54.md#merfish-brain-brotqfvuiwcymblv0000), [merfish-brain-reyibwi1gji3ynrk0000](/datasets/md/6c.md#merfish-brain-reyibwi1gji3ynrk0000), [merfish-brain-utnc9pql22hahgip0000](/datasets/md/58.md#merfish-brain-utnc9pql22hahgip0000), [merfish-brain-lfmdyagxjwb67dbz0000](/datasets/md/e5.md#merfish-brain-lfmdyagxjwb67dbz0000), [merfish-brain-sumnrbt46hvezbr30000](/datasets/md/10.md#merfish-brain-sumnrbt46hvezbr30000), [merfish-brain-avlkrkxgkusu3uer0000](/datasets/md/b7.md#merfish-brain-avlkrkxgkusu3uer0000), [merfish-brain-jbqtw5jvxxmxfs950000](/datasets/md/94.md#merfish-brain-jbqtw5jvxxmxfs950000), [merfish-brain-pvrzrxqdge62nnwe0000](/datasets/md/4f.md#merfish-brain-pvrzrxqdge62nnwe0000), [merfish-brain-85kvh9nrtnm8kqzz0000](/datasets/md/bb.md#merfish-brain-85kvh9nrtnm8kqzz0000), [merfish-brain-jmuray9dauyyslzh0000](/datasets/md/3c.md#merfish-brain-jmuray9dauyyslzh0000), [merfish-brain-sdbjnjiutxeo6nbb0000](/datasets/md/ca.md#merfish-brain-sdbjnjiutxeo6nbb0000), [merfish-brain-dzfmlbf6s0wkkiim0000](/datasets/md/1a.md#merfish-brain-dzfmlbf6s0wkkiim0000), [merfish-brain-pyh5ufrzda8n1hpf0000](/datasets/md/75.md#merfish-brain-pyh5ufrzda8n1hpf0000), [merfish-brain-jozwchywwu7efqjd0000](/datasets/md/40.md#merfish-brain-jozwchywwu7efqjd0000), [merfish-brain-mlagf0wt5loaslze0000](/datasets/md/30.md#merfish-brain-mlagf0wt5loaslze0000), [merfish-brain-yjqeatb1wtpvlcay0000](/datasets/md/19.md#merfish-brain-yjqeatb1wtpvlcay0000), [merfish-brain-tidkolpean5xhdmh0000](/datasets/md/44.md#merfish-brain-tidkolpean5xhdmh0000), [merfish-brain-z8oqrnw5ei7z4byc0000](/datasets/md/0e.md#merfish-brain-z8oqrnw5ei7z4byc0000), [merfish-brain-yuosjrkqz5bneboy0000](/datasets/md/41.md#merfish-brain-yuosjrkqz5bneboy0000), [merfish-brain-3l3uyhzy0lsoacaf0000](/datasets/md/e6.md#merfish-brain-3l3uyhzy0lsoacaf0000), [merfish-brain-isr7obv2nqbro7vm0000](/datasets/md/fe.md#merfish-brain-isr7obv2nqbro7vm0000), [merfish-brain-zftrpyqohqfoie2d0000](/datasets/md/da.md#merfish-brain-zftrpyqohqfoie2d0000), [merfish-brain-impyl0qfhma1li1w0000](/datasets/md/aa.md#merfish-brain-impyl0qfhma1li1w0000), [merfish-brain-t7qilghcexqj4a570000](/datasets/md/e2.md#merfish-brain-t7qilghcexqj4a570000), [merfish-brain-jgpd1ajfqrggaz5p0000](/datasets/md/97.md#merfish-brain-jgpd1ajfqrggaz5p0000), [merfish-brain-qksaaj8qmbciq7ws0000](/datasets/md/d4.md#merfish-brain-qksaaj8qmbciq7ws0000), [merfish-brain-k52505ra1rgfz9io0000](/datasets/md/af.md#merfish-brain-k52505ra1rgfz9io0000), [merfish-brain-foosay4snpo9dvhp0000](/datasets/md/02.md#merfish-brain-foosay4snpo9dvhp0000), [merfish-brain-sjlmdwxrddxbhx2l0000](/datasets/md/52.md#merfish-brain-sjlmdwxrddxbhx2l0000), [merfish-brain-milaiwhgkdzzsp6b0000](/datasets/md/51.md#merfish-brain-milaiwhgkdzzsp6b0000), [merfish-brain-reaevamsrh6yzeqc0000](/datasets/md/0c.md#merfish-brain-reaevamsrh6yzeqc0000), [merfish-brain-0ganeiiphly6lymg0000](/datasets/md/cd.md#merfish-brain-0ganeiiphly6lymg0000), [merfish-brain-ium81iiphcowonsa0000](/datasets/md/60.md#merfish-brain-ium81iiphcowonsa0000), [merfish-brain-ura4c6lqny1uanam0000](/datasets/md/7f.md#merfish-brain-ura4c6lqny1uanam0000), [merfish-brain-ebwnrlwrttqv1hms0000](/datasets/md/40.md#merfish-brain-ebwnrlwrttqv1hms0000), [merfish-brain-epiioikkbgdqgqhx0000](/datasets/md/fc.md#merfish-brain-epiioikkbgdqgqhx0000), [merfish-brain-keihpivygx9mmeyl0000](/datasets/md/be.md#merfish-brain-keihpivygx9mmeyl0000), [merfish-brain-eei53vcevs3v8kca0000](/datasets/md/5e.md#merfish-brain-eei53vcevs3v8kca0000), [merfish-brain-qncdsvwsvlsezwuy0000](/datasets/md/07.md#merfish-brain-qncdsvwsvlsezwuy0000), [merfish-brain-2t7r8k8kb1epedru0000](/datasets/md/88.md#merfish-brain-2t7r8k8kb1epedru0000), [merfish-brain-zcshs8hrtt5yzbni0000](/datasets/md/0a.md#merfish-brain-zcshs8hrtt5yzbni0000), [merfish-brain-p7qdr92kajtjw8xr0000](/datasets/md/7d.md#merfish-brain-p7qdr92kajtjw8xr0000), [merfish-brain-ov4alhl6qenvdn2a0000](/datasets/md/d9.md#merfish-brain-ov4alhl6qenvdn2a0000), [merfish-brain-gtxkxbcawevgs69u0000](/datasets/md/6c.md#merfish-brain-gtxkxbcawevgs69u0000), [merfish-brain-wktfgpnavmseo2gu0000](/datasets/md/94.md#merfish-brain-wktfgpnavmseo2gu0000), [merfish-brain-qb42x4jg3ixm7t5w0000](/datasets/md/cb.md#merfish-brain-qb42x4jg3ixm7t5w0000), [merfish-brain-yizszv4ptqddwobc0000](/datasets/md/a9.md#merfish-brain-yizszv4ptqddwobc0000), [merfish-brain-twwuqhw5xhtjsvlx0000](/datasets/md/e3.md#merfish-brain-twwuqhw5xhtjsvlx0000), [merfish-brain-nndaivva9jxoy4lr0000](/datasets/md/c0.md#merfish-brain-nndaivva9jxoy4lr0000) ## geo-gse221106 - Page: /collections/geo-gse221106/ - Kind: other - Datasets: 8 - Members: [vizgen-merscope-olfactory-bulb-bd2htiqjhoaievn90000](/datasets/md/cf.md#vizgen-merscope-olfactory-bulb-bd2htiqjhoaievn90000), [vizgen-merscope-olfactory-bulb-ubqumxausrafmbp60000](/datasets/md/cd.md#vizgen-merscope-olfactory-bulb-ubqumxausrafmbp60000), [vizgen-merscope-olfactory-bulb-rzgb24d4tkxzcqnq0000](/datasets/md/87.md#vizgen-merscope-olfactory-bulb-rzgb24d4tkxzcqnq0000), [vizgen-merscope-olfactory-bulb-tkzsqjt3l1a4jx0v0000](/datasets/md/c2.md#vizgen-merscope-olfactory-bulb-tkzsqjt3l1a4jx0v0000), [vizgen-merscope-olfactory-bulb-uonhfxiwzrd8swm20000](/datasets/md/f5.md#vizgen-merscope-olfactory-bulb-uonhfxiwzrd8swm20000), [vizgen-merscope-olfactory-bulb-xtid8hyizkx09amh0000](/datasets/md/91.md#vizgen-merscope-olfactory-bulb-xtid8hyizkx09amh0000), [vizgen-merscope-olfactory-bulb-xxhwkbq7ir1ahcj70000](/datasets/md/94.md#vizgen-merscope-olfactory-bulb-xxhwkbq7ir1ahcj70000), [vizgen-merscope-olfactory-bulb-xitsubcyczddbtz00000](/datasets/md/ae.md#vizgen-merscope-olfactory-bulb-xitsubcyczddbtz00000) ## Senescent-like microglia limit remyelination through the senescence associated secretory phenotype. - Page: /collections/geo-gse268492/ - Kind: publication - Datasets: 2 - Reference: 10.1038/s41467-025-57632-w - Members: [vizgen-merscope-spinal-cord-agzrll5jz5c3kfzk0000](/datasets/md/51.md#vizgen-merscope-spinal-cord-agzrll5jz5c3kfzk0000), [vizgen-merscope-spinal-cord-ltrntrbvjjauwjxi0000](/datasets/md/ff.md#vizgen-merscope-spinal-cord-ltrntrbvjjauwjxi0000) ## geo-gse269906 - Page: /collections/geo-gse269906/ - Kind: other - Datasets: 12 - Members: [stereo-seq-prefrontal-cortex-eany6era0u2kywij0000](/datasets/md/80.md#stereo-seq-prefrontal-cortex-eany6era0u2kywij0000), [stereo-seq-prefrontal-cortex-xhhsnkd60b0dlxig0000](/datasets/md/46.md#stereo-seq-prefrontal-cortex-xhhsnkd60b0dlxig0000), [stereo-seq-prefrontal-cortex-nooajmgjdcilnqwv0000](/datasets/md/3d.md#stereo-seq-prefrontal-cortex-nooajmgjdcilnqwv0000), [stereo-seq-prefrontal-cortex-z9wpq9vtilufnl830000](/datasets/md/0f.md#stereo-seq-prefrontal-cortex-z9wpq9vtilufnl830000), [stereo-seq-prefrontal-cortex-nkabdtdf8hrfakxf0000](/datasets/md/28.md#stereo-seq-prefrontal-cortex-nkabdtdf8hrfakxf0000), [stereo-seq-prefrontal-cortex-cmtmvax5q46mtutl0000](/datasets/md/29.md#stereo-seq-prefrontal-cortex-cmtmvax5q46mtutl0000), [stereo-seq-prefrontal-cortex-29h8u538fc7unngy0000](/datasets/md/ef.md#stereo-seq-prefrontal-cortex-29h8u538fc7unngy0000), [stereo-seq-prefrontal-cortex-8o04zqnmruc0yo5f0000](/datasets/md/7c.md#stereo-seq-prefrontal-cortex-8o04zqnmruc0yo5f0000), [stereo-seq-prefrontal-cortex-nqheemjheljle1ib0000](/datasets/md/e4.md#stereo-seq-prefrontal-cortex-nqheemjheljle1ib0000), [stereo-seq-prefrontal-cortex-b3yfcvuhqcdyrkjy0000](/datasets/md/c5.md#stereo-seq-prefrontal-cortex-b3yfcvuhqcdyrkjy0000), [stereo-seq-prefrontal-cortex-p0oi3cjguoooebx90000](/datasets/md/5c.md#stereo-seq-prefrontal-cortex-p0oi3cjguoooebx90000), [stereo-seq-prefrontal-cortex-morarrr4iwqzlxxn0000](/datasets/md/8c.md#stereo-seq-prefrontal-cortex-morarrr4iwqzlxxn0000)