Integration of spatial and single cell transcriptomics localizes epithelial-immune cross-talk in kidney injury

Needs pip install lamindb and network access to the Lamin database, which is limited during the alpha. If it fails, use the Client tab.

import lamindb as ln

db = ln.DB("scverse/spatialdata-db")
coll = db.Collection.get(key="hest-integration-of-spatial-and-single-cell-transcriptomics-localizes-epithelial-immune-cross-talk-in-kidney-injury")
coll.ordered_artifacts.to_dataframe()   # the 3 members, ordered

# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]